Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein hu-alpha | EYX78_11735 | Not Available | Positive | 2333801 - 2334073 | 9535.51 |
| duf1481 domain-containing protein | EYX78_11740 | Not Available | Positive | 2334086 - 2334781 | 26352.9 |
| zinc resistance sensor/chaperone zrap | EYX78_11745 | Not Available | Negative | 2334783 - 2335202 | 15100.1 |
| two-component system sensor histidine kinase zras | EYX78_11750 | Not Available | Positive | 2335440 - 2336816 | 50411.0 |
| sigma-54-dependent response regulator transcription factor zrar | EYX78_11755 | Not Available | Positive | 2336813 - 2338138 | 48542.6 |
| phosphoribosylamine--glycine ligase | EYX78_11760 | Not Available | Negative | 2338135 - 2339424 | 45989.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EYX78_11765 | Not Available | Negative | 2339436 - 2341025 | 57329.5 |
| duf1795 domain-containing protein | EYX78_11770 | Not Available | Negative | 2341540 - 2341908 | 13979.7 |
| type vi secretion system tip protein vgrg | EYX78_11775 | Not Available | Negative | 2341959 - 2343953 | 74133.4 |
| hypothetical protein | EYX78_11780 | Not Available | Negative | 2344175 - 2344531 | 13444.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





