Escherichia coli strain Broiler parent54

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent54 is a Gram-negative, rod-shaped bacterium characterized by its presence in pairs or singles and its facultative anaerobic metabolism. This strain is motile, possessing flagella, and thrives optimally at a temperature of 37°C within a mesophilic temperature range. It is classified as free-living and has a single replicon and a double membrane structure. The ecological niche of E. coli strain Broiler parent54 includes a wide array of hosts, such as Homo sapiens, Gallus gallus (chickens), and various other mammals, birds, and even plants like Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). This versatility in host association underscores its significant role in diverse biological interactions. Clinically, E. coli strain Broiler parent54 has been implicated in several health issues, notably urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's pathogenicity in humans is significant, as it can lead to a range of diseases from mild diarrhea to severe systemic infections, underscoring its importance in public health. The broad host range and pathogenic potential of E. coli strain Broiler parent54 illustrate its ecological adaptability and the complexities of host-microbe interactions. Understanding these dynamics is crucial for managing infections and mitigating the health impacts associated with this strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent54

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent54

Gene Summary

Adenine Count

1299956 bp

Thymine Count

1302070 bp

Guanine Count

1313883 bp

Cytosine Count

1346883 bp

Genome Length

5262811 bp

Protein-coding Genes

4820 genes

Non-Coding Genes

322 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive486160 - 486173Not Available
IntegraseEYX77_02500Not AvailableNegative496941 - 49807143170.1
excisionaseEYX77_02505Not AvailableNegative498049 - 4982979225.44
EndodeoxyribonucleaseEYX77_02510Not AvailableNegative498362 - 50083392735.6
duf1482 family proteinEYX77_02515Not AvailableNegative500926 - 5011176785.13
cell division inhibition protein dicbEYX77_02520Not AvailableNegative501114 - 5013027100.74
hypothetical proteinEYX77_02525Not AvailablePositive501703 - 5018676138.51
hypothetical proteinEYX77_02530Not AvailableNegative501868 - 5020898479.06
Hypothetical proteinEYX77_02535Not AvailableNegative502249 - 5024045705.6
Putative repressor proteinEYX77_02540Not AvailableNegative502696 - 50303411843.4

Displaying genes 11 – 20 of 5142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total