Escherichia coli strain Broiler parent54

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent54 is a Gram-negative, rod-shaped bacterium characterized by its presence in pairs or singles and its facultative anaerobic metabolism. This strain is motile, possessing flagella, and thrives optimally at a temperature of 37°C within a mesophilic temperature range. It is classified as free-living and has a single replicon and a double membrane structure. The ecological niche of E. coli strain Broiler parent54 includes a wide array of hosts, such as Homo sapiens, Gallus gallus (chickens), and various other mammals, birds, and even plants like Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). This versatility in host association underscores its significant role in diverse biological interactions. Clinically, E. coli strain Broiler parent54 has been implicated in several health issues, notably urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's pathogenicity in humans is significant, as it can lead to a range of diseases from mild diarrhea to severe systemic infections, underscoring its importance in public health. The broad host range and pathogenic potential of E. coli strain Broiler parent54 illustrate its ecological adaptability and the complexities of host-microbe interactions. Understanding these dynamics is crucial for managing infections and mitigating the health impacts associated with this strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent54

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent54

Gene Summary

Adenine Count

1299956 bp

Thymine Count

1302070 bp

Guanine Count

1313883 bp

Cytosine Count

1346883 bp

Genome Length

5262811 bp

Protein-coding Genes

4820 genes

Non-Coding Genes

322 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chorismate synthaseEYX77_19125Not AvailableNegative3755420 - 375650539153.9
50s ribosomal protein l3 n(5)-glutamine methyltransferaseEYX77_19130Not AvailableNegative3756540 - 375747235017.7
endonuclease smrbEYX77_19135Not AvailablePositive3757638 - 375818921014.5
duf2544 domain-containing proteinEYX77_19145Not AvailableNegative3758509 - 375935130927.8
fimbrial proteinEYX77_19150Not AvailableNegative3759353 - 375988018741.4
fimbrial proteinEYX77_19155Not AvailableNegative3759877 - 376035617275.2
hypothetical proteinEYX77_19160Not AvailableNegative3760353 - 376085617566.1
fimbrial protein stfdEYX77_19165Not AvailableNegative3760873 - 376162527942.0
fimbrial biogenesis outer membrane usher proteinEYX77_19170Not AvailableNegative3761645 - 376429397179.1
phosphohistidine phosphatase sixaEYX77_19180Not AvailableNegative3765483 - 376596817219.8

Displaying genes 3711 – 3720 of 5142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total