Burkholderia cepacia strain b99

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia strain b99 is a Gram-negative microaerophilic bacterium primarily found in the rhizosphere. This strain has a single replicon and can interact with various hosts, including Homo sapiens (humans), Viridiplantae (plants), Anura (frogs), and Allium cepa (onion). In humans, B. cepacia strain b99 is associated with significant health effects, including pneumonia and infective endocarditis, specifically native valve endocarditis. These conditions highlight the bacterium's potential pathogenicity, particularly in immunocompromised individuals or those with underlying health issues. Ecologically, B. cepacia strain b99's presence in the rhizosphere suggests it may play a role in plant-microbe interactions, potentially influencing plant health and soil dynamics. Its ability to inhabit diverse biological hosts indicates a level of adaptability, which may allow it to thrive in various environments. The bacterium's implications for both human health and its ecological role warrant further investigation, particularly in the context of its interactions within the rhizosphere and its pathogenic potential in clinical settings. The accession number for strain b99 is SSHL00000000.1, which can be used for reference in genomic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
Strainstrain b99

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia strain b99
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Anura
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia strain b99

Gene Summary

Adenine Count

1440195 bp

Thymine Count

1443559 bp

Guanine Count

2880504 bp

Cytosine Count

2878694 bp

Genome Length

8642952 bp

Protein-coding Genes

7756 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rip metalloprotease rsepE6L39_17275Not AvailableNegative3728703 - 373008849168.5
1-deoxy-d-xylulose-5-phosphate reductoisomeraseE6L39_17280Not AvailableNegative3730100 - 373129642059.7
phosphatidate cytidylyltransferaseE6L39_17285Not AvailableNegative3731312 - 373213328433.1
di-trans,poly-cis-decaprenylcistransferaseE6L39_17290Not AvailableNegative3732127 - 373290929503.1
ribosome recycling factorE6L39_17295Not AvailableNegative3732957 - 373351720800.1
ump kinaseE6L39_17300Not AvailableNegative3733609 - 373432225405.9
elongation factor tsE6L39_17305Not AvailableNegative3734486 - 373536731023.4
30s ribosomal protein s2E6L39_17310Not AvailableNegative3735530 - 373627027116.8
type i methionyl aminopeptidaseE6L39_17320Not AvailablePositive3736648 - 373746329674.8
[protein-pii] uridylyltransferaseE6L39_17325Not AvailablePositive3737518 - 374009497074.5

Displaying genes 3431 – 3440 of 7906 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infective endocarditisCausesPMC3112426
Native valve endocarditisCausesPMC3112426
PneumoniaCausesPMC9294674

Displaying health effects 1 – 3 of 3 in total