Histophilus somni strain UOC-EPH-KLM-09

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni strain UOC-EPH-KLM-09 is a Gram-negative, rod-shaped bacterium primarily associated with host organisms, specifically Bos taurus (cattle). This strain exhibits a mesophilic temperature range with an optimal growth temperature of 35°C. It is classified as an aerobe and facultative anaerobe, indicating its ability to thrive in both oxygen-rich and low-oxygen environments. The bacterium possesses a single replicon and is characterized by its double membrane structure, typical of Gram-negative bacteria. Histophilus somni is notably linked to significant health impacts in cattle, being a causative agent of pneumonia and contributing to bovine respiratory disease (BRD) and the bovine respiratory disease complex (BRDC). Given its association with respiratory diseases in cattle, Histophilus somni strain UOC-EPH-KLM-09 plays a crucial role in the health and productivity of livestock. Understanding its biological characteristics and pathogenic potential is essential for managing and preventing outbreaks of BRD in cattle, which can have substantial economic implications for the agricultural industry.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
Strainstrain UOC-EPH-KLM-09

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Bos taurus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni strain UOC-EPH-KLM-09 Contig_97, whole genome

Gene Summary

Adenine Count

654185 bp

Thymine Count

653972 bp

Guanine Count

388260 bp

Cytosine Count

383018 bp

Genome Length

2079435 bp

Protein-coding Genes

1797 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtp diphosphokinaseE5418_02495Not AvailableNegative545475 - 54771285012.7
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdE5418_02500Not AvailableNegative547724 - 54904350860.2
dna repair protein recoE5418_02505Not AvailableNegative549064 - 54977427177.1
3,4-dihydroxy-2-butanone-4-phosphate synthaseE5418_02510Not AvailableNegative549948 - 55059223250.7
accessory factor ubik family proteinE5418_02515Not AvailablePositive550940 - 5511799331.47
multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadrE5418_02520Not AvailablePositive551253 - 55253049537.6
hypothetical proteinE5418_02525Not AvailablePositive552535 - 55322125983.2
50s ribosomal protein l17E5418_02530Not AvailableNegative553292 - 55367814452.6
dna-directed rna polymerase subunit alphaE5418_02535Not AvailableNegative553720 - 55470936599.9
30s ribosomal protein s4E5418_02540Not AvailableNegative554742 - 55536223493.5

Displaying genes 551 – 560 of 1891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PneumoniaCausesPMC281138
Bovine respiratory diseaseCausesPMC12473052
BrdCausesPMC12473052
Bovine respiratory disease complexCausesPMC12943494
BrdcCausesPMC12943494

Displaying health effects 1 – 5 of 5 in total