Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Histophilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Histophilus |
| Species | Histophilus somni |
| Strain | strain UOC-EPH-KLM-09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe; facultative anaerobe |
| Optimal temperature | 35 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
654185 bp
Thymine Count
653972 bp
Guanine Count
388260 bp
Cytosine Count
383018 bp
Genome Length
2079435 bp
Protein-coding Genes
1797 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | E5418_06650 | Not Available | Positive | 1404484 - 1405251 | 28034.2 |
| zinc abc transporter substrate-binding protein znua | E5418_06655 | Not Available | Positive | 1405345 - 1406379 | 38687.2 |
| cytidine deaminase | E5418_06665 | Not Available | Positive | 1407101 - 1408012 | 34371.7 |
| trna pseudouridine(38-40) synthase trua | E5418_06670 | Not Available | Positive | 1408044 - 1408853 | 30662.5 |
| valine--trna ligase | E5418_06675 | Not Available | Negative | 1408909 - 1411773 | 109876.0 |
| site-specific dna-methyltransferase | E5418_06680 | Not Available | Negative | 1411795 - 1412535 | 28514.2 |
| tdeiii family type ii restriction endonuclease | E5418_06685 | Not Available | Negative | 1412538 - 1413350 | 31302.9 |
| fic family protein | E5418_06690 | Not Available | Negative | 1413541 - 1414290 | 29204.2 |
| hypothetical protein | E5418_06695 | Not Available | Negative | 1414455 - 1414910 | 16978.1 |
| dna polymerase iii subunit chi | E5418_06700 | Not Available | Negative | 1414932 - 1415375 | 17093.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Pneumonia | Causes | PMC281138 |
| Bovine respiratory disease | Causes | PMC12473052 |
| Brd | Causes | PMC12473052 |
| Bovine respiratory disease complex | Causes | PMC12943494 |
| Brdc | Causes | PMC12943494 |
