Histophilus somni strain UOC-EPH-KLM-09

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni strain UOC-EPH-KLM-09 is a Gram-negative, rod-shaped bacterium primarily associated with host organisms, specifically Bos taurus (cattle). This strain exhibits a mesophilic temperature range with an optimal growth temperature of 35°C. It is classified as an aerobe and facultative anaerobe, indicating its ability to thrive in both oxygen-rich and low-oxygen environments. The bacterium possesses a single replicon and is characterized by its double membrane structure, typical of Gram-negative bacteria. Histophilus somni is notably linked to significant health impacts in cattle, being a causative agent of pneumonia and contributing to bovine respiratory disease (BRD) and the bovine respiratory disease complex (BRDC). Given its association with respiratory diseases in cattle, Histophilus somni strain UOC-EPH-KLM-09 plays a crucial role in the health and productivity of livestock. Understanding its biological characteristics and pathogenic potential is essential for managing and preventing outbreaks of BRD in cattle, which can have substantial economic implications for the agricultural industry.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
Strainstrain UOC-EPH-KLM-09

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Bos taurus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni strain UOC-EPH-KLM-09 Contig_97, whole genome

Gene Summary

Adenine Count

654185 bp

Thymine Count

653972 bp

Guanine Count

388260 bp

Cytosine Count

383018 bp

Genome Length

2079435 bp

Protein-coding Genes

1797 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase assembly factor 2 family proteinE5418_05720Not AvailablePositive1219394 - 121964810286.4
rna polymerase sigma factor rpoeE5418_05725Not AvailablePositive1219754 - 122032921813.0
transcriptional regulatorE5418_05730Not AvailablePositive1220362 - 122094622337.7
sigma-e factor regulatory protein rsebE5418_05735Not AvailablePositive1221010 - 122194836332.4
hypothetical proteinE5418_05740Not AvailablePositive1221956 - 122239015919.9
molybdopterin-guanine dinucleotide biosynthesis protein bE5418_05745Not AvailablePositive1222404 - 122290118572.8
hypothetical proteinE5418_05750Not AvailableNegative1222940 - 122364126527.4
diaminopimelate epimeraseE5418_05755Not AvailablePositive1223892 - 122471630375.9
lipopolysaccharide heptosyltransferase rfacE5418_05760Not AvailableNegative1224766 - 122573136441.6
lipopolysaccharide heptosyltransferase iiE5418_05765Not AvailableNegative1225733 - 122677338857.2

Displaying genes 1171 – 1180 of 1891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PneumoniaCausesPMC281138
Bovine respiratory diseaseCausesPMC12473052
BrdCausesPMC12473052
Bovine respiratory disease complexCausesPMC12943494
BrdcCausesPMC12943494

Displaying health effects 1 – 5 of 5 in total