Ensifer adhaerens strain YX1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ensifer

Description

Ensifer adhaerens strain YX1 is a notable bacterium characterized by its single replicon. This trait suggests a streamlined genomic organization, which can have implications for its metabolism and ecological adaptability. The strain is cataloged under the accession number SSBU00000000.1, indicating its availability in biological databases for further research. As a member of the Ensifer genus, YX1 is likely involved in nitrogen fixation, a critical process that contributes to soil fertility and plant health. The efficiency of nitrogen-fixing bacteria in agricultural settings can enhance crop yield and sustainability. Given its affiliation with the Ensifer genus, strain YX1 may play a role in symbiotic relationships with plants, particularly legumes, which are known to benefit from such interactions. The presence of a single replicon also suggests a certain level of genetic stability, which can be advantageous in environmental adaptations. This trait may enable Ensifer adhaerens strain YX1 to thrive in specific niches, potentially influencing its ecological role within the microbiome of soils or plant root systems. Understanding the characteristics of strain YX1 can provide insights into its functionality and contributions to soil ecosystems, particularly regarding nutrient cycling and plant interactions. Such knowledge is crucial for agricultural practices and ecological conservation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusEnsifer
SpeciesEnsifer adhaerens
Strainstrain YX1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ensifer adhaerens strain YX1 Scaffold100, whole genome shotgun

Gene Summary

Adenine Count

1356196 bp

Thymine Count

1367577 bp

Guanine Count

2262274 bp

Cytosine Count

2253384 bp

Genome Length

7239451 bp

Protein-coding Genes

6574 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinE5176_26785Not AvailablePositive5702191 - 570318336051.9
efflux rnd transporter periplasmic adaptor subunitE5176_26790Not AvailablePositive5703708 - 570489540999.4
efflux rnd transporter permease subunitE5176_26795Not AvailablePositive5704910 - 5708227120087.0
crp/fnr family transcriptional regulatorE5176_26800Not AvailablePositive5708387 - 570906724872.2
urease accessory protein uregE5176_26805Not AvailableNegative5709115 - 570972621829.4
urease accessory protein urefE5176_26810Not AvailableNegative5709805 - 571047623354.8
urease accessory protein ureeE5176_26815Not AvailableNegative5710469 - 571094217478.1
antibiotic biosynthesis monooxygenaseE5176_26820Not AvailableNegative5710945 - 571124110881.1
peroxiredoxinE5176_26825Not AvailableNegative5711411 - 571195019907.4
urease subunit alphaE5176_26835Not AvailableNegative5712931 - 571464360587.6

Displaying genes 5231 – 5240 of 6627 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.