Ensifer adhaerens strain YX1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ensifer

Description

Ensifer adhaerens strain YX1 is a notable bacterium characterized by its single replicon. This trait suggests a streamlined genomic organization, which can have implications for its metabolism and ecological adaptability. The strain is cataloged under the accession number SSBU00000000.1, indicating its availability in biological databases for further research. As a member of the Ensifer genus, YX1 is likely involved in nitrogen fixation, a critical process that contributes to soil fertility and plant health. The efficiency of nitrogen-fixing bacteria in agricultural settings can enhance crop yield and sustainability. Given its affiliation with the Ensifer genus, strain YX1 may play a role in symbiotic relationships with plants, particularly legumes, which are known to benefit from such interactions. The presence of a single replicon also suggests a certain level of genetic stability, which can be advantageous in environmental adaptations. This trait may enable Ensifer adhaerens strain YX1 to thrive in specific niches, potentially influencing its ecological role within the microbiome of soils or plant root systems. Understanding the characteristics of strain YX1 can provide insights into its functionality and contributions to soil ecosystems, particularly regarding nutrient cycling and plant interactions. Such knowledge is crucial for agricultural practices and ecological conservation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusEnsifer
SpeciesEnsifer adhaerens
Strainstrain YX1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ensifer adhaerens strain YX1 Scaffold100, whole genome shotgun

Gene Summary

Adenine Count

1356196 bp

Thymine Count

1367577 bp

Guanine Count

2262274 bp

Cytosine Count

2253384 bp

Genome Length

7239451 bp

Protein-coding Genes

6574 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)/fad-dependent oxidoreductaseE5176_22785Not AvailableNegative4790117 - 479191666998.4
2,3-butanediol dehydrogenaseE5176_22790Not AvailableNegative4791984 - 479305738055.7
sigma-54-dependent fis family transcriptional regulatorE5176_22795Not AvailableNegative4793221 - 479509268390.8
tetr/acrr family transcriptional regulatorE5176_22800Not AvailableNegative4795286 - 479595124894.7
trap transporter small permeaseE5176_22805Not AvailablePositive4796230 - 479679320180.2
trap transporter large permease subunitE5176_22810Not AvailablePositive4796804 - 479808444525.1
trap transporter substrate-binding proteinE5176_22815Not AvailablePositive4798148 - 479916436923.3
shikimate dehydrogenaseE5176_22820Not AvailablePositive4799241 - 480011631061.4
sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing proteinE5176_22825Not AvailablePositive4800146 - 480203569640.9
porinE5176_22830Not AvailableNegative4802368 - 480344139342.7

Displaying genes 4451 – 4460 of 6627 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.