Streptococcus pyogenes strain emm1_S16

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus pyogenes strain emm1_S16 is a Gram-positive bacterium with a cocci shape, typically arranged in chains or pairs. This strain is classified as a facultative anaerobe, allowing it to thrive in various oxygen environments. It is mesophilic, with an optimal growth temperature of 30°C, and possesses a single membrane and one replicon. The bacterium is non-motile and does not have flagella. S. pyogenes strain emm1_S16 is known to be associated with several serious health conditions in humans, including pneumonia, meningitis, and necrotizing fasciitis. Other notable health effects include sepsis, cellulitis, otitis media, and a range of skin and soft tissue infections, such as impetigo and pyoderma. It is also responsible for acute rheumatic fever, streptococcal toxic shock syndrome (STSS), and various upper respiratory tract infections, such as pharyngitis and scarlet fever. The habitat of this strain is host-associated, with Homo sapiens and other Metazoa serving as its primary hosts. As a free-living pathogen, S. pyogenes emm1_S16 plays a significant role in human health, illustrating the complex interactions between microbial pathogens and their hosts. Understanding the pathogenicity and health impacts of this strain can enhance our knowledge of bacterial infections and inform treatment strategies for the diseases it causes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pyogenes
Strainstrain emm1_S16

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus pyogenes strain emm1_S16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus pyogenes strain emm1_S16

Gene Summary

Adenine Count

539964 bp

Thymine Count

538975 bp

Guanine Count

341532 bp

Cytosine Count

331809 bp

Genome Length

1752336 bp

Protein-coding Genes

1624 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseE6A88_00400Not AvailablePositive72249 - 7313633341.4
carbohydrate abc transporter permeaseE6A88_00405Not AvailablePositive73149 - 7397930541.4
duf624 domain-containing proteinE6A88_00410Not AvailablePositive74136 - 7479824901.6
n-acetylneuraminate lyaseE6A88_00415Not AvailablePositive74810 - 7572433182.0
rok family proteinE6A88_00420Not AvailablePositive75746 - 7668433368.7
murr/rpir family transcriptional regulatorE6A88_00425Not AvailableNegative76795 - 7762531381.8
tatd family deoxyribonucleaseE6A88_00430Not AvailablePositive77877 - 7870130698.8
ribonuclease m5E6A88_00435Not AvailablePositive78694 - 7926321797.9
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaE6A88_00440Not AvailablePositive79377 - 8024932703.7
ribosome small subunit-dependent gtpase aE6A88_00445Not AvailablePositive80673 - 8154532866.3

Displaying genes 171 – 180 of 1774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Skin and soft tissue infectionCausesPMC11555966
Suppurative pharyngitisCausesPMC11555966
TonsillitisCausesPMC11555966
ScarlatinaCausesPMC11555966
Brain abscessCausesPMC11555966
Sterile-site infectionsCausesPMC11555966
Streptococcal toxic shock syndrome (stss)CausesPMC11735781
Necrotizing fasciitisCausesPMC11735781
MeningitisCausesPMC11735781
Acute rheumatic fever (arf)CausesPMC11735781

Displaying health effects 1 – 10 of 62 in total