Streptococcus pyogenes strain emm1_S16

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus pyogenes strain emm1_S16 is a Gram-positive bacterium with a cocci shape, typically arranged in chains or pairs. This strain is classified as a facultative anaerobe, allowing it to thrive in various oxygen environments. It is mesophilic, with an optimal growth temperature of 30°C, and possesses a single membrane and one replicon. The bacterium is non-motile and does not have flagella. S. pyogenes strain emm1_S16 is known to be associated with several serious health conditions in humans, including pneumonia, meningitis, and necrotizing fasciitis. Other notable health effects include sepsis, cellulitis, otitis media, and a range of skin and soft tissue infections, such as impetigo and pyoderma. It is also responsible for acute rheumatic fever, streptococcal toxic shock syndrome (STSS), and various upper respiratory tract infections, such as pharyngitis and scarlet fever. The habitat of this strain is host-associated, with Homo sapiens and other Metazoa serving as its primary hosts. As a free-living pathogen, S. pyogenes emm1_S16 plays a significant role in human health, illustrating the complex interactions between microbial pathogens and their hosts. Understanding the pathogenicity and health impacts of this strain can enhance our knowledge of bacterial infections and inform treatment strategies for the diseases it causes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pyogenes
Strainstrain emm1_S16

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus pyogenes strain emm1_S16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus pyogenes strain emm1_S16

Gene Summary

Adenine Count

539964 bp

Thymine Count

538975 bp

Guanine Count

341532 bp

Cytosine Count

331809 bp

Genome Length

1752336 bp

Protein-coding Genes

1624 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinE6A88_04935Not AvailablePositive968796 - 96913413194.9
plp-dependent aminotransferase family proteinE6A88_04945Not AvailableNegative969532 - 9697297517.96
duf1292 domain-containing proteinE6A88_04950Not AvailableNegative969958 - 97026311545.8
holliday junction resolvase ruvxE6A88_04955Not AvailableNegative970275 - 97069415760.1
ireb family regulatory phosphoproteinE6A88_04960Not AvailableNegative970691 - 97096010364.1
transcriptional regulator spxE6A88_04965Not AvailableNegative971073 - 97147115005.2
recombinase recaE6A88_04970Not AvailableNegative971762 - 97289840591.5
competence/damage-inducible protein aE6A88_04975Not AvailableNegative972987 - 97425845992.4
dna-3-methyladenine glycosylase iE6A88_04980Not AvailableNegative974327 - 97488721434.6
holliday junction branch migration protein ruvaE6A88_04985Not AvailableNegative974897 - 97549321880.5

Displaying genes 1021 – 1030 of 1774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Skin and soft tissue infectionCausesPMC11555966
Suppurative pharyngitisCausesPMC11555966
TonsillitisCausesPMC11555966
ScarlatinaCausesPMC11555966
Brain abscessCausesPMC11555966
Sterile-site infectionsCausesPMC11555966
Streptococcal toxic shock syndrome (stss)CausesPMC11735781
Necrotizing fasciitisCausesPMC11735781
MeningitisCausesPMC11735781
Acute rheumatic fever (arf)CausesPMC11735781

Displaying health effects 1 – 10 of 62 in total