Streptococcus pyogenes strain emm1_S18

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus pyogenes strain emm1_S18 is a Gram-positive bacterium characterized by its cocci shape and arrangement in chains or pairs. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions. It has a single membrane and a single replicon, indicating a simpler cellular structure. The optimal growth temperature for this strain is 30°C, placing it within the mesophilic temperature range. S. pyogenes emm1_S18 is a free-living organism that primarily inhabits human hosts (Homo sapiens) and various metazoans. It is notably pathogenic, responsible for a wide array of health complications, including pneumonia, meningitis, necrotizing fasciitis, and sepsis. Other associated infections include cellulitis, otitis media, skin infections, and pharyngitis, among others. This strain is also implicated in severe conditions such as streptococcal toxic shock syndrome (STSS) and acute rheumatic fever (ARF), highlighting its significant impact on human health. The presence of flagella, although this strain is non-motile, suggests adaptations that may enhance survival in host-associated environments. The diverse range of diseases caused by S. pyogenes emphasizes its potential for causing severe clinical outcomes, which can vary from localized infections to life-threatening systemic conditions. As such, S. pyogenes strain emm1_S18 serves as a critical pathogen in clinical microbiology, necessitating ongoing research to better understand its biology, pathogenic mechanisms, and ecological interactions within host populations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pyogenes
Strainstrain emm1_S18

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus pyogenes strain emm1_S18
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus pyogenes strain emm1_S18

Gene Summary

Adenine Count

546264 bp

Thymine Count

556059 bp

Guanine Count

326095 bp

Cytosine Count

360208 bp

Genome Length

1788666 bp

Protein-coding Genes

1591 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heat-inducible transcriptional repressor hrcaE6A85_03675Not AvailableNegative727682 - 72871639025.9
n-acetylmuramoyl-l-alanine amidaseE6A85_03680Not AvailableNegative728851 - 72942021929.9
d-alanyl-d-alanine carboxypeptidase family proteinE6A85_03685Not AvailableNegative729417 - 73016027960.2
histidine phosphatase family proteinE6A85_03690Not AvailableNegative730150 - 73085726763.6
glsb/yeaq/ymge family stress response membrane proteinE6A85_03695Not AvailableNegative731248 - 7314878280.57
hypothetical proteinE6A85_03700Not AvailableNegative731706 - 7319218013.96
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbE6A85_03705Not AvailableNegative731918 - 73335753432.3
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataE6A85_03710Not AvailableNegative733357 - 73482352293.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcE6A85_03715Not AvailableNegative734823 - 73512511070.1
hypothetical proteinE6A85_03725Not AvailablePositive735779 - 7359646949.68

Displaying genes 821 – 830 of 1763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Skin and soft tissue infectionCausesPMC11555966
Suppurative pharyngitisCausesPMC11555966
TonsillitisCausesPMC11555966
ScarlatinaCausesPMC11555966
Brain abscessCausesPMC11555966
Sterile-site infectionsCausesPMC11555966
Streptococcal toxic shock syndrome (stss)CausesPMC11735781
Necrotizing fasciitisCausesPMC11735781
MeningitisCausesPMC11735781
Acute rheumatic fever (arf)CausesPMC11735781

Displaying health effects 1 – 10 of 62 in total