Streptococcus pyogenes strain emm1_S18

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus pyogenes strain emm1_S18 is a Gram-positive bacterium characterized by its cocci shape and arrangement in chains or pairs. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions. It has a single membrane and a single replicon, indicating a simpler cellular structure. The optimal growth temperature for this strain is 30°C, placing it within the mesophilic temperature range. S. pyogenes emm1_S18 is a free-living organism that primarily inhabits human hosts (Homo sapiens) and various metazoans. It is notably pathogenic, responsible for a wide array of health complications, including pneumonia, meningitis, necrotizing fasciitis, and sepsis. Other associated infections include cellulitis, otitis media, skin infections, and pharyngitis, among others. This strain is also implicated in severe conditions such as streptococcal toxic shock syndrome (STSS) and acute rheumatic fever (ARF), highlighting its significant impact on human health. The presence of flagella, although this strain is non-motile, suggests adaptations that may enhance survival in host-associated environments. The diverse range of diseases caused by S. pyogenes emphasizes its potential for causing severe clinical outcomes, which can vary from localized infections to life-threatening systemic conditions. As such, S. pyogenes strain emm1_S18 serves as a critical pathogen in clinical microbiology, necessitating ongoing research to better understand its biology, pathogenic mechanisms, and ecological interactions within host populations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pyogenes
Strainstrain emm1_S18

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus pyogenes strain emm1_S18
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus pyogenes strain emm1_S18

Gene Summary

Adenine Count

546264 bp

Thymine Count

556059 bp

Guanine Count

326095 bp

Cytosine Count

360208 bp

Genome Length

1788666 bp

Protein-coding Genes

1591 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtpase obgeE6A85_06300Not AvailablePositive1244353 - 124566648335.7
hypothetical proteinE6A85_06305Not AvailablePositive1245735 - 12458936090.23
nicotinamide riboside transporter pnucE6A85_06310Not AvailableNegative1245898 - 124659326287.6
glycoside hydrolase family 1 proteinE6A85_06315Not AvailablePositive1246818 - 124821853148.8
duf871 domain-containing proteinE6A85_06320Not AvailablePositive1248227 - 124932141222.4
prd domain-containing proteinE6A85_06325Not AvailablePositive1249427 - 125142176688.0
pts sugar transporter subunit iibE6A85_06330Not AvailablePositive1251444 - 125175511344.0
pts lactose/cellobiose transporter subunit iiaE6A85_06335Not AvailablePositive1251758 - 125209312020.4
duf3284 domain-containing proteinE6A85_06340Not AvailablePositive1252090 - 125253917188.6
amino acid abc transporter atp-binding proteinE6A85_06350Not AvailableNegative1253602 - 125434227163.9

Displaying genes 1261 – 1270 of 1763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Skin and soft tissue infectionCausesPMC11555966
Suppurative pharyngitisCausesPMC11555966
TonsillitisCausesPMC11555966
ScarlatinaCausesPMC11555966
Brain abscessCausesPMC11555966
Sterile-site infectionsCausesPMC11555966
Streptococcal toxic shock syndrome (stss)CausesPMC11735781
Necrotizing fasciitisCausesPMC11735781
MeningitisCausesPMC11735781
Acute rheumatic fever (arf)CausesPMC11735781

Displaying health effects 1 – 10 of 62 in total