Marinobacter orientalis strain W62

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter orientalis strain W62 is a notable member of the Marinobacter genus, characterized by the presence of flagella, which suggests a capacity for motility. This trait is significant as it may enhance its ability to navigate through aquatic environments or colonize surfaces, potentially influencing its ecological roles in marine ecosystems. The strain possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in varying environmental conditions. The genome of Marinobacter orientalis strain W62 is documented under the accession number SRZX00000000.1, providing a reference point for further genomic studies and comparisons within the Marinobacter genus. Ecologically, the presence of flagella may facilitate interactions with other microorganisms and contribute to biogeochemical processes in marine habitats. As a motile organism, Marinobacter orientalis strain W62 may play a role in nutrient cycling and the degradation of organic matter, which are crucial processes in maintaining the health and balance of marine ecosystems. The genomic data available could further elucidate its metabolic pathways and ecological functions, contributing to our understanding of microbial diversity and activity in oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter orientalis
Strainstrain W62

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter orientalis strain W62 Scaffold12, whole genome

Gene Summary

Adenine Count

854911 bp

Thymine Count

853207 bp

Guanine Count

1141407 bp

Cytosine Count

1151965 bp

Genome Length

4001490 bp

Protein-coding Genes

3555 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionyl-trna formyltransferaseDIT72_05505Not AvailableNegative1172260 - 117319533757.7
peptide deformylaseDIT72_05510Not AvailableNegative1173274 - 117377719261.2
lysm peptidoglycan-binding domain-containing proteinDIT72_05515Not AvailablePositive1174150 - 117516637533.6
dna-protecting protein dpraDIT72_05520Not AvailablePositive1175338 - 117648040666.9
sua5/ycio/yrdc/ywlc family proteinDIT72_05525Not AvailablePositive1176507 - 117708221264.8
oxygen-dependent coproporphyrinogen oxidaseDIT72_05530Not AvailablePositive1177091 - 117801735091.9
shikimate dehydrogenaseDIT72_05535Not AvailablePositive1178010 - 117883729579.1
flagellar motor protein pomaDIT72_05540Not AvailablePositive1178923 - 117969627822.3
type vi secretion system protein tsslDIT72_05545Not AvailablePositive1179697 - 118053330337.1
hypothetical proteinDIT72_05550Not AvailablePositive1180658 - 118097511641.7

Displaying genes 1081 – 1090 of 3598 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.