Bacteroides muris (ex Afrizal et al. 2022) strain NM69_E16B

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides muris strain NM69_E16B is a rod-shaped bacterium characterized by the presence of flagella. This trait suggests that the organism possesses the ability to exhibit motility, which can be crucial for its survival in various environments, particularly within the gastrointestinal tracts of hosts. The strain NM69_E16B has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and stability within its ecological niche. The genomic data for this strain is accessible under the accession number SRYZ00000000.1, allowing for further research and analysis of its genetic features. In the context of microbiology, Bacteroides species, including B. muris, are often associated with the human gut microbiome, where they play significant roles in the digestion of complex carbohydrates and the maintenance of gut health. The motility conferred by flagella may enhance the strain's ability to colonize and thrive in the competitive environment of the gut, thereby contributing to its ecological role. The presence of a single replicon may also suggest adaptations for efficient resource utilization, which is critical for survival in nutrient-variable environments. Understanding these traits can provide insights into the ecological dynamics of intestinal microbiota and their interactions with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides muris (ex Afrizal et al. 2022)
Strainstrain NM69_E16B

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides muris (ex Afrizal et al. 2022) strain NM69_E16B


Gene Summary

Adenine Count

1174563 bp

Thymine Count

1196623 bp

Guanine Count

1015330 bp

Cytosine Count

1000611 bp

Genome Length

4387127 bp

Protein-coding Genes

3531 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseE5355_12955Not AvailableNegative3029947 - 303122146510.7
abc transporter atp-binding proteinE5355_12960Not AvailableNegative3031273 - 303193824616.1
hlyd family efflux transporter periplasmic adaptor subunitE5355_12975Not AvailableNegative3032475 - 303372246546.0
lysm peptidoglycan-binding domain-containing proteinE5355_12980Not AvailableNegative3034065 - 303498836083.4
cytidine deaminaseE5355_12985Not AvailablePositive3035092 - 303557417749.1
abc-f family atp-binding cassette domain-containing proteinE5355_12990Not AvailablePositive3035933 - 303756761098.2
flavodoxin family proteinE5355_12995Not AvailablePositive3037673 - 303821220085.5
4fe-4s dicluster domain-containing proteinE5355_13000Not AvailablePositive3038245 - 303974154739.5
aldo/keto reductaseE5355_13005Not AvailablePositive3039790 - 304119353242.2
hypothetical proteinE5355_13010Not AvailableNegative3041424 - 304287556520.7

Displaying genes 2431 – 2440 of 3590 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.