Bacteroides muris (ex Afrizal et al. 2022) strain NM69_E16B

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides muris strain NM69_E16B is a rod-shaped bacterium characterized by the presence of flagella. This trait suggests that the organism possesses the ability to exhibit motility, which can be crucial for its survival in various environments, particularly within the gastrointestinal tracts of hosts. The strain NM69_E16B has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and stability within its ecological niche. The genomic data for this strain is accessible under the accession number SRYZ00000000.1, allowing for further research and analysis of its genetic features. In the context of microbiology, Bacteroides species, including B. muris, are often associated with the human gut microbiome, where they play significant roles in the digestion of complex carbohydrates and the maintenance of gut health. The motility conferred by flagella may enhance the strain's ability to colonize and thrive in the competitive environment of the gut, thereby contributing to its ecological role. The presence of a single replicon may also suggest adaptations for efficient resource utilization, which is critical for survival in nutrient-variable environments. Understanding these traits can provide insights into the ecological dynamics of intestinal microbiota and their interactions with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides muris (ex Afrizal et al. 2022)
Strainstrain NM69_E16B

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides muris (ex Afrizal et al. 2022) strain NM69_E16B


Gene Summary

Adenine Count

1174563 bp

Thymine Count

1196623 bp

Guanine Count

1015330 bp

Cytosine Count

1000611 bp

Genome Length

4387127 bp

Protein-coding Genes

3531 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)h nitroreductaseE5355_12740Not AvailablePositive2979738 - 298027719722.3
yihy/virulence factor brkb family proteinE5355_12745Not AvailableNegative2980358 - 298167750700.2
hypothetical proteinE5355_12755Not AvailablePositive2982304 - 298350644764.8
dipeptide epimeraseE5355_12760Not AvailablePositive2983609 - 298478142964.2
transglutaminase domain-containing proteinE5355_12765Not AvailablePositive2984778 - 298611251634.9
do family serine endopeptidaseE5355_12770Not AvailablePositive2986438 - 298796754546.5
rna polymerase sigma factor rpod/sigaE5355_12775Not AvailablePositive2988160 - 298902032775.3
hypothetical proteinE5355_12780Not AvailablePositive2989141 - 298953915360.7
hypothetical proteinE5355_12785Not AvailablePositive2989557 - 299130263857.9
pyridine nucleotide-disulfide oxidoreductaseE5355_12790Not AvailablePositive2991478 - 299395589073.0

Displaying genes 2391 – 2400 of 3590 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.