Bacteroides muris (ex Afrizal et al. 2022) strain NM69_E16B

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides muris strain NM69_E16B is a rod-shaped bacterium characterized by the presence of flagella. This trait suggests that the organism possesses the ability to exhibit motility, which can be crucial for its survival in various environments, particularly within the gastrointestinal tracts of hosts. The strain NM69_E16B has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and stability within its ecological niche. The genomic data for this strain is accessible under the accession number SRYZ00000000.1, allowing for further research and analysis of its genetic features. In the context of microbiology, Bacteroides species, including B. muris, are often associated with the human gut microbiome, where they play significant roles in the digestion of complex carbohydrates and the maintenance of gut health. The motility conferred by flagella may enhance the strain's ability to colonize and thrive in the competitive environment of the gut, thereby contributing to its ecological role. The presence of a single replicon may also suggest adaptations for efficient resource utilization, which is critical for survival in nutrient-variable environments. Understanding these traits can provide insights into the ecological dynamics of intestinal microbiota and their interactions with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides muris (ex Afrizal et al. 2022)
Strainstrain NM69_E16B

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides muris (ex Afrizal et al. 2022) strain NM69_E16B


Gene Summary

Adenine Count

1174563 bp

Thymine Count

1196623 bp

Guanine Count

1015330 bp

Cytosine Count

1000611 bp

Genome Length

4387127 bp

Protein-coding Genes

3531 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yebc/pmpr family dna-binding transcriptional regulatorE5355_11730Not AvailableNegative2756245 - 275698227838.7
phenylalanine--trna ligase subunit betaE5355_11735Not AvailableNegative2757028 - 275949090994.0
hypothetical proteinE5355_11745Not AvailablePositive2760426 - 276164044936.7
n-acetylgalactosamine-6-sulfataseE5355_11750Not AvailableNegative2761698 - 276318856212.7
beta-hexosaminidaseE5355_11755Not AvailableNegative2763201 - 276476059768.6
ragb/susd family nutrient uptake outer membrane proteinE5355_11760Not AvailableNegative2764861 - 276671471612.6
susc/raga family tonb-linked outer membrane proteinE5355_11765Not AvailableNegative2766728 - 2770174130083.0
rna polymerase sigma-70 factorE5355_11775Not AvailableNegative2771375 - 277193821847.5
transcriptional repressorE5355_11785Not AvailableNegative2772986 - 277342016034.5
cadmium-translocating p-type atpaseE5355_11790Not AvailableNegative2773426 - 277536670215.7

Displaying genes 2211 – 2220 of 3590 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.