Bacteroides muris (ex Afrizal et al. 2022) strain NM69_E16B

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides muris strain NM69_E16B is a rod-shaped bacterium characterized by the presence of flagella. This trait suggests that the organism possesses the ability to exhibit motility, which can be crucial for its survival in various environments, particularly within the gastrointestinal tracts of hosts. The strain NM69_E16B has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and stability within its ecological niche. The genomic data for this strain is accessible under the accession number SRYZ00000000.1, allowing for further research and analysis of its genetic features. In the context of microbiology, Bacteroides species, including B. muris, are often associated with the human gut microbiome, where they play significant roles in the digestion of complex carbohydrates and the maintenance of gut health. The motility conferred by flagella may enhance the strain's ability to colonize and thrive in the competitive environment of the gut, thereby contributing to its ecological role. The presence of a single replicon may also suggest adaptations for efficient resource utilization, which is critical for survival in nutrient-variable environments. Understanding these traits can provide insights into the ecological dynamics of intestinal microbiota and their interactions with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides muris (ex Afrizal et al. 2022)
Strainstrain NM69_E16B

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides muris (ex Afrizal et al. 2022) strain NM69_E16B


Gene Summary

Adenine Count

1174563 bp

Thymine Count

1196623 bp

Guanine Count

1015330 bp

Cytosine Count

1000611 bp

Genome Length

4387127 bp

Protein-coding Genes

3531 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminopeptidase p family proteinE5355_10335Not AvailablePositive2438043 - 243920642550.4
duf3843 family proteinE5355_10340Not AvailableNegative2439403 - 244039537945.5
holliday junction branch migration protein ruvaE5355_10345Not AvailableNegative2440392 - 244099421317.2
hypothetical proteinE5355_10350Not AvailableNegative2440991 - 24411827535.42
diaminopimelate dehydrogenaseE5355_10355Not AvailablePositive2441190 - 244208932455.4
rip metalloprotease rsepE5355_10360Not AvailableNegative2442233 - 244356450359.7
1-deoxy-d-xylulose-5-phosphate reductoisomeraseE5355_10365Not AvailableNegative2443676 - 244482142088.0
m23 family metallopeptidaseE5355_10370Not AvailableNegative2444858 - 244571532437.1
16s rrna processing protein rimmE5355_10375Not AvailableNegative2445712 - 244624820443.3
udp-n-acetylglucosamine 1-carboxyvinyltransferaseE5355_10380Not AvailableNegative2446250 - 244755747474.9

Displaying genes 1951 – 1960 of 3590 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.