Bacteroides caecimuris strain NM63_1-25

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides caecimuris strain NM63_1-25 is characterized as a rod-shaped bacterium, which is a common morphology observed within the Bacteroides genus. This strain possesses flagella, indicating its capability for motility, which may play a role in its ecological interactions and colonization processes. The organism is noted to have a single replicon, suggesting a streamlined genetic architecture that may be advantageous for its survival and adaptation in specific environments. The reference accession number for this strain is SRYX00000000.1, which provides a unique identifier for genomic data and further research. Understanding the genetic and phenotypic traits of Bacteroides caecimuris can provide insights into its ecological role, particularly in the gut microbiome where members of the Bacteroides genus are commonly found. Bacteroides species are known to contribute to the digestion of complex carbohydrates and play a significant role in maintaining gut health. The motility provided by flagella may enhance the ability of Bacteroides caecimuris strain NM63_1-25 to navigate the intestinal environment, potentially influencing its interactions with other microbial communities and the host. Thus, the traits of this strain suggest its involvement in gut ecological dynamics, underscoring the importance of motile bacteria in promoting microbial diversity and function within the gastrointestinal tract.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides caecimuris
Strainstrain NM63_1-25

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides caecimuris strain NM63_1-25

Gene Summary

Adenine Count

1266503 bp

Thymine Count

1277688 bp

Guanine Count

936844 bp

Cytosine Count

909498 bp

Genome Length

4390533 bp

Protein-coding Genes

3434 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dmt family transporterE5353_00130Not AvailableNegative39320 - 4019532476.0
aaa family atpaseE5353_00135Not AvailablePositive40326 - 4207768479.4
glycosyl hydrolase family 18E5353_00140Not AvailableNegative42232 - 4480295219.9
leucine--trna ligaseE5353_00145Not AvailablePositive45412 - 48246108688.0
yitt family proteinE5353_00150Not AvailablePositive48377 - 4929434259.4
non-canonical purine ntp diphosphataseE5353_00155Not AvailablePositive49345 - 4992621390.4
flagellar motor protein motbE5353_00160Not AvailablePositive49960 - 5080231731.4
quinolinate synthase nadaE5353_00165Not AvailableNegative50995 - 5193334295.4
hypothetical proteinE5353_00170Not AvailablePositive52120 - 522996852.51
trmh family rna methyltransferaseE5353_00175Not AvailablePositive52435 - 5296519912.1

Displaying genes 61 – 70 of 3513 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.