Parabacteroides distasonis strain NM39_I3

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides distasonis strain NM39_I3 is a Gram-positive, anaerobic bacterium characterized by its rod shape and the presence of flagella, although it is non-motile. This strain is part of the mesophilic temperature range, indicating it thrives in moderate temperatures typically found in its natural environment. It possesses a unique cellular structure with two membranes and a single replicon. Parabacteroides distasonis is host-associated, primarily found in association with Homo sapiens, suggesting an ecological role within the human microbiome. As a free-living organism, it contributes to the complex microbial community dynamics in the human gut. This relationship underscores its potential significance in human health, particularly in processes such as digestion and immune modulation. Notably, this strain is non-sporulating, which may influence its survival strategies and interactions within the gut environment. The access number for this strain is SRYM00000000.1, which can be referenced for further genomic and biochemical studies. In summary, Parabacteroides distasonis strain NM39_I3 exemplifies a specialized anaerobic bacterium adapted to a specific habitat within the human host. Its traits highlight the intricate relationships that exist in the gut microbiome, emphasizing the importance of such microorganisms in maintaining human health and contributing to the overall balance of microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides distasonis
Strainstrain NM39_I3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Parabacteroides distasonis strain NM39_I3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides distasonis strain NM39_I3

Gene Summary

Adenine Count

1157255 bp

Thymine Count

1177416 bp

Guanine Count

947337 bp

Cytosine Count

934107 bp

Genome Length

4216115 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrogenase maturation nickel metallochaperone hypaE5342_11000Not AvailableNegative2532709 - 253305612723.5
carbamoyltransferase hypfE5342_11005Not AvailableNegative2533069 - 253535185596.3
hypc/hybg/hupf family hydrogenase formation chaperoneE5342_11010Not AvailablePositive2535511 - 25357448532.55
hydrogenase formation protein hypdE5342_11015Not AvailablePositive2535732 - 253681140070.8
hydrogenase expression/formation protein hypeE5342_11020Not AvailablePositive2536818 - 253786737512.4
twin-arginine translocation signal domain-containing proteinE5342_11025Not AvailablePositive2537887 - 253898439775.8
nickel-dependent hydrogenase large subunitE5342_11030Not AvailablePositive2539000 - 254072164711.2
ni/fe-hydrogenase, b-type cytochrome subunitE5342_11035Not AvailablePositive2540736 - 254147328888.6
hydrogenase maturation proteaseE5342_11040Not AvailablePositive2541470 - 254194917685.8
aquaporin family proteinE5342_11045Not AvailableNegative2541915 - 254265225561.5

Displaying genes 2081 – 2090 of 3570 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.