Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine--trna ligase | E5339_02660 | Not Available | Negative | 668983 - 671601 | 97206.4 |
| m23 family metallopeptidase | E5339_02665 | Not Available | Positive | 671739 - 672707 | 36196.4 |
| merr family transcriptional regulator | E5339_02670 | Not Available | Positive | 672743 - 673090 | 13727.9 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | E5339_02675 | Not Available | Negative | 673181 - 675451 | 86241.8 |
| lysm peptidoglycan-binding domain-containing protein | E5339_02680 | Not Available | Negative | 675553 - 676815 | 47763.6 |
| hypothetical protein | E5339_02685 | Not Available | Negative | 676820 - 677527 | 26767.2 |
| parb/repb/spo0j family partition protein | E5339_02690 | Not Available | Negative | 677595 - 678491 | 33458.2 |
| para family protein | E5339_02695 | Not Available | Negative | 678497 - 679264 | 27989.0 |
| 5'/3'-nucleotidase sure | E5339_02700 | Not Available | Positive | 679522 - 680295 | 28403.9 |
| lipid-a-disaccharide synthase | E5339_02705 | Not Available | Positive | 680292 - 681431 | 43013.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


