Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | E5339_18500 | Not Available | Negative | 4527437 - 4528711 | 47194.7 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | E5339_18505 | Not Available | Negative | 4528942 - 4530237 | 47792.7 |
| acetyltransferase | E5339_18510 | Not Available | Negative | 4530246 - 4531040 | 31081.2 |
| pyridoxamine 5'-phosphate oxidase family protein | E5339_18515 | Not Available | Negative | 4531049 - 4531528 | 18395.0 |
| yggs family pyridoxal phosphate-dependent enzyme | E5339_18520 | Not Available | Negative | 4531556 - 4532227 | 25555.9 |
| pyridoxamine 5'-phosphate oxidase family protein | E5339_18525 | Not Available | Negative | 4532232 - 4532705 | 17578.2 |
| plp-dependent aminotransferase family protein | E5339_18530 | Not Available | Positive | 4532779 - 4534203 | 54047.4 |
| hypothetical protein | E5339_18535 | Not Available | Positive | 4535760 - 4536185 | 16355.0 |
| relaxase | E5339_18540 | Not Available | Positive | 4536164 - 4537483 | 49896.2 |
| dna-binding protein | E5339_18545 | Not Available | Positive | 4537700 - 4537984 | 10927.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


