Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | E5339_18235 | Not Available | Positive | 4459060 - 4460055 | 37152.1 |
| glucose-6-phosphate isomerase | E5339_18240 | Not Available | Positive | 4460069 - 4461412 | 48975.8 |
| had family hydrolase | E5339_18245 | Not Available | Positive | 4461559 - 4462293 | 27043.4 |
| hypothetical protein | E5339_18250 | Not Available | Negative | 4462407 - 4463651 | 47216.9 |
| ragb/susd family nutrient uptake outer membrane protein | E5339_18255 | Not Available | Negative | 4463664 - 4465253 | 60824.8 |
| susc/raga family tonb-linked outer membrane protein | E5339_18260 | Not Available | Negative | 4465269 - 4469006 | 139623.0 |
| duf4974 domain-containing protein | E5339_18265 | Not Available | Negative | 4469154 - 4470236 | 41354.4 |
| sigma-70 family rna polymerase sigma factor | E5339_18270 | Not Available | Negative | 4470444 - 4471079 | 24963.3 |
| rok family transcriptional regulator | E5339_18275 | Not Available | Negative | 4471193 - 4472398 | 44672.2 |
| n-acetylneuraminate lyase | E5339_18280 | Not Available | Positive | 4472704 - 4473618 | 34050.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


