Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m24 family metallopeptidase | E5339_16675 | Not Available | Negative | 4104122 - 4105495 | 51110.5 |
| rna polymerase factor sigma-54 | E5339_16680 | Not Available | Positive | 4105624 - 4107093 | 55956.0 |
| phosphatase pap2 family protein | E5339_16685 | Not Available | Positive | 4107104 - 4107760 | 24838.8 |
| glycine cleavage system protein gcvh | E5339_16690 | Not Available | Positive | 4107798 - 4108178 | 14160.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | E5339_16695 | Not Available | Positive | 4108304 - 4108813 | 17715.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | E5339_16700 | Not Available | Positive | 4108908 - 4110752 | 68040.4 |
| rpn family recombination-promoting nuclease/putative transposase | E5339_16705 | Not Available | Negative | 4110899 - 4111825 | 36307.3 |
| aaa family atpase | E5339_16710 | Not Available | Negative | 4111923 - 4113503 | 60895.1 |
| methyltransferase domain-containing protein | E5339_16715 | Not Available | Negative | 4113703 - 4114737 | 38622.8 |
| hypothetical protein | E5339_16720 | Not Available | Negative | 4114715 - 4115605 | 34014.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


