Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit l | E5339_01430 | Not Available | Positive | 372724 - 374625 | 70025.8 |
| nadh-quinone oxidoreductase subunit m | E5339_01435 | Not Available | Positive | 374693 - 376174 | 53704.6 |
| nadh-quinone oxidoreductase subunit n | E5339_01440 | Not Available | Positive | 376200 - 377621 | 52304.6 |
| glucuronyl hydrolase | E5339_01445 | Not Available | Positive | 377873 - 379051 | 44346.9 |
| hamp domain-containing histidine kinase | E5339_01450 | Not Available | Negative | 379053 - 381056 | 76948.7 |
| glycoside hydrolase family 28 protein | E5339_01455 | Not Available | Positive | 381321 - 382727 | 52549.0 |
| gtp-binding protein | E5339_01460 | Not Available | Negative | 382796 - 384007 | 45963.8 |
| alpha-l-fucosidase | E5339_01465 | Not Available | Positive | 384226 - 385548 | 50032.4 |
| helix-turn-helix domain-containing protein | E5339_01475 | Not Available | Negative | 385767 - 386132 | 13616.5 |
| type ii toxin-antitoxin system higb family toxin | E5339_01480 | Not Available | Negative | 386137 - 386430 | 11541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


