Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | E5339_16460 | Not Available | Negative | 4054886 - 4055380 | 18153.5 |
| hypothetical protein | E5339_16465 | Not Available | Negative | 4055393 - 4055605 | 7857.66 |
| duf4248 domain-containing protein | E5339_16470 | Not Available | Negative | 4055617 - 4055811 | 7465.13 |
| duf3987 domain-containing protein | E5339_16475 | Not Available | Negative | 4056101 - 4057906 | 67864.6 |
| virulence protein e | E5339_16480 | Not Available | Negative | 4057946 - 4058611 | 24998.8 |
| nucleotidyltransferase domain-containing protein | E5339_16490 | Not Available | Positive | 4059597 - 4059905 | 11591.2 |
| hepn domain-containing protein | E5339_16495 | Not Available | Positive | 4059902 - 4060303 | 15577.6 |
| dead/deah box helicase | E5339_16500 | Not Available | Positive | 4060396 - 4062711 | 88290.4 |
| porin family protein | E5339_16505 | Not Available | Negative | 4062874 - 4063389 | 18998.8 |
| site-specific integrase | E5339_16510 | Not Available | Negative | 4063680 - 4064909 | 47147.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


