Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | E5339_16195 | Not Available | Negative | 3992865 - 3994472 | 60325.3 |
| slc13/dass family transporter | E5339_16200 | Not Available | Positive | 3994756 - 3996270 | 54511.9 |
| crispr-associated endonuclease cas2 | E5339_16210 | Not Available | Negative | 3997866 - 3998156 | 10989.3 |
| type i-c crispr-associated endonuclease cas1 | E5339_16215 | Not Available | Negative | 3998166 - 3999188 | 38537.0 |
| crispr-associated protein cas4 | E5339_16220 | Not Available | Negative | 3999185 - 3999850 | 25942.2 |
| type i-c crispr-associated protein cas7/csd2 | E5339_16225 | Not Available | Negative | 3999862 - 4000722 | 31649.8 |
| type i-c crispr-associated protein cas8c/csd1 | E5339_16230 | Not Available | Negative | 4000742 - 4002454 | 64360.9 |
| type i-c crispr-associated protein cas5 | E5339_16235 | Not Available | Negative | 4002451 - 4003131 | 26826.3 |
| crispr-associated helicase cas3' | E5339_16240 | Not Available | Negative | 4003180 - 4005405 | 84795.5 |
| transposase | E5339_16250 | Not Available | Positive | 4006114 - 4006593 | 17941.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


