Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | E5339_01330 | Not Available | Positive | 347040 - 347720 | 25854.9 |
| nucleotide pyrophosphatase | E5339_01335 | Not Available | Positive | 348150 - 349046 | 33833.6 |
| hypothetical protein | E5339_01340 | Not Available | Negative | 349142 - 349837 | 26655.9 |
| glycoside hydrolase family 28 protein | E5339_01345 | Not Available | Positive | 351310 - 352803 | 55493.9 |
| beta-galactosidase | E5339_01350 | Not Available | Positive | 352901 - 355813 | 109633.0 |
| exopolygalacturonase | E5339_01355 | Not Available | Positive | 355855 - 357159 | 49320.0 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | E5339_01360 | Not Available | Negative | 357272 - 359737 | 92798.9 |
| gscfa domain protein | E5339_01365 | Not Available | Negative | 359713 - 360699 | 38587.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | E5339_01370 | Not Available | Positive | 360792 - 362690 | 70250.8 |
| trk system potassium transporter trka | E5339_01375 | Not Available | Positive | 362704 - 364044 | 49267.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


