Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | E5339_01280 | Not Available | Negative | 329504 - 331126 | 61027.4 |
| glycoside hydrolase | E5339_01285 | Not Available | Negative | 331148 - 333364 | 84195.7 |
| rhamnogalacturonan acetylesterase | E5339_01290 | Not Available | Negative | 333467 - 334714 | 47970.2 |
| glycoside hydrolase family 2 protein | E5339_01295 | Not Available | Negative | 334723 - 337200 | 93288.3 |
| ragb/susd family nutrient uptake outer membrane protein | E5339_01300 | Not Available | Negative | 337414 - 339465 | 77939.2 |
| susc/raga family tonb-linked outer membrane protein | E5339_01305 | Not Available | Negative | 339479 - 343027 | 130822.0 |
| duf4974 domain-containing protein | E5339_01310 | Not Available | Negative | 343182 - 344126 | 36036.2 |
| rna polymerase sigma-70 factor | E5339_01315 | Not Available | Negative | 344244 - 344831 | 22842.5 |
| hypothetical protein | E5339_01320 | Not Available | Negative | 344926 - 345135 | 7688.12 |
| helicase | E5339_01325 | Not Available | Negative | 345314 - 346711 | 53124.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


