Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | E5339_10880 | Not Available | Positive | 2709631 - 2710215 | 23163.5 |
| duf4974 domain-containing protein | E5339_10885 | Not Available | Positive | 2710283 - 2711443 | 43931.2 |
| susc/raga family tonb-linked outer membrane protein | E5339_10890 | Not Available | Positive | 2711493 - 2714921 | 127681.0 |
| ragb/susd family nutrient uptake outer membrane protein | E5339_10895 | Not Available | Positive | 2714933 - 2716399 | 56076.9 |
| duf4465 domain-containing protein | E5339_10900 | Not Available | Positive | 2716419 - 2717234 | 30310.6 |
| tlpa family protein disulfide reductase | E5339_10905 | Not Available | Positive | 2717240 - 2718592 | 50599.7 |
| dna-binding protein | E5339_10910 | Not Available | Negative | 2718827 - 2719459 | 23845.7 |
| site-specific integrase | E5339_10920 | Not Available | Positive | 2720482 - 2721717 | 47762.9 |
| hypothetical protein | E5339_10925 | Not Available | Positive | 2721741 - 2722136 | 15083.4 |
| hypothetical protein | E5339_10930 | Not Available | Positive | 2722972 - 2724522 | 60122.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


