Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine kinase | E5339_10520 | Not Available | Negative | 2614223 - 2615095 | 32880.5 |
| glutamate racemase | E5339_10525 | Not Available | Negative | 2615152 - 2615997 | 31191.8 |
| omph family outer membrane protein | E5339_10530 | Not Available | Negative | 2616100 - 2616603 | 19360.4 |
| omph family outer membrane protein | E5339_10535 | Not Available | Negative | 2616661 - 2617176 | 18936.6 |
| outer membrane protein assembly factor bama | E5339_10540 | Not Available | Negative | 2617197 - 2619839 | 100649.0 |
| isoprenyl transferase | E5339_10545 | Not Available | Negative | 2619851 - 2620582 | 28059.4 |
| hypothetical protein | E5339_10550 | Not Available | Negative | 2620616 - 2622013 | 52199.0 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | E5339_10555 | Not Available | Negative | 2622126 - 2623193 | 40345.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | E5339_10560 | Not Available | Positive | 2623238 - 2624074 | 31761.4 |
| recx family transcriptional regulator | E5339_10565 | Not Available | Positive | 2624076 - 2624561 | 18711.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


