Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| licd family protein | E5339_10295 | Not Available | Negative | 2566785 - 2567582 | 31693.4 |
| nad/nadp octopine/nopaline dehydrogenase | E5339_10300 | Not Available | Negative | 2567586 - 2568686 | 41097.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | E5339_10305 | Not Available | Negative | 2568683 - 2570488 | 70105.1 |
| glycosyl transferase | E5339_10310 | Not Available | Positive | 2570578 - 2571408 | 31598.9 |
| lipopolysaccharide biosynthesis protein | E5339_10315 | Not Available | Negative | 2571440 - 2572876 | 53317.1 |
| methionine--trna ligase | E5339_10330 | Not Available | Negative | 2573619 - 2575661 | 77647.7 |
| hypothetical protein | E5339_10335 | Not Available | Negative | 2575916 - 2576386 | 17284.8 |
| signal peptidase i | E5339_10340 | Not Available | Negative | 2576410 - 2577123 | 27241.5 |
| hypothetical protein | E5339_10345 | Not Available | Negative | 2577148 - 2577762 | 23606.8 |
| 6-bladed beta-propeller | E5339_10350 | Not Available | Negative | 2577755 - 2578999 | 48001.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


