Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | E5339_10095 | Not Available | Negative | 2508400 - 2508672 | 9192.06 |
| rhomboid family intramembrane serine protease | E5339_10100 | Not Available | Positive | 2508883 - 2509560 | 25321.5 |
| rhomboid family intramembrane serine protease | E5339_10105 | Not Available | Positive | 2509541 - 2510434 | 33809.4 |
| endonuclease | E5339_10110 | Not Available | Positive | 2510438 - 2511517 | 40248.0 |
| m3 family peptidase | E5339_10115 | Not Available | Positive | 2511544 - 2513631 | 79054.5 |
| protein translocase subunit secdf | E5339_10120 | Not Available | Positive | 2513810 - 2516788 | 108940.0 |
| sugar kinase | E5339_10125 | Not Available | Negative | 2517040 - 2518104 | 38743.1 |
| response regulator | E5339_10130 | Not Available | Positive | 2518369 - 2522307 | 149086.0 |
| tonb-dependent receptor | E5339_10135 | Not Available | Positive | 2522578 - 2525784 | 118183.0 |
| ragb/susd family nutrient uptake outer membrane protein | E5339_10140 | Not Available | Positive | 2525805 - 2527526 | 65163.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


