Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | E5339_07880 | Not Available | Negative | 1994884 - 1996275 | 54060.0 |
| hypothetical protein | E5339_07885 | Not Available | Positive | 1996472 - 1998871 | 90154.2 |
| duf4974 domain-containing protein | E5339_07890 | Not Available | Positive | 1998960 - 1999970 | 38523.1 |
| susc/raga family tonb-linked outer membrane protein | E5339_07895 | Not Available | Positive | 2000142 - 2003684 | 132312.0 |
| ragb/susd family nutrient uptake outer membrane protein | E5339_07900 | Not Available | Positive | 2003735 - 2005669 | 74025.5 |
| hypothetical protein | E5339_07905 | Not Available | Positive | 2005797 - 2006996 | 45671.7 |
| hypothetical protein | E5339_07910 | Not Available | Negative | 2007576 - 2007791 | 8401.46 |
| xre family transcriptional regulator | E5339_07915 | Not Available | Negative | 2007796 - 2008269 | 17926.3 |
| hypothetical protein | E5339_07920 | Not Available | Positive | 2008439 - 2008825 | 15034.8 |
| hypothetical protein | E5339_07925 | Not Available | Negative | 2008769 - 2009251 | 18363.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


