Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | E5339_06125 | Not Available | Positive | 1564245 - 1567274 | 113026.0 |
| ragb/susd family nutrient uptake outer membrane protein | E5339_06130 | Not Available | Positive | 1567295 - 1568974 | 63729.3 |
| duf4859 domain-containing protein | E5339_06135 | Not Available | Positive | 1569006 - 1570016 | 36439.5 |
| glycoside hydrolase family 97 protein | E5339_06140 | Not Available | Positive | 1570333 - 1573056 | 103188.0 |
| glycoside hydrolase | E5339_06145 | Not Available | Positive | 1573093 - 1575495 | 90093.3 |
| glycoside hydrolase family 127 protein | E5339_06150 | Not Available | Positive | 1575566 - 1577971 | 89764.0 |
| s9 family peptidase | E5339_06155 | Not Available | Positive | 1578004 - 1580247 | 85898.0 |
| pectate lyase | E5339_06160 | Not Available | Positive | 1580488 - 1582629 | 81625.2 |
| aaa family atpase | E5339_06165 | Not Available | Negative | 1582701 - 1584428 | 67985.9 |
| l-aspartate oxidase | E5339_06170 | Not Available | Negative | 1584656 - 1586239 | 58935.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


