Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase | E5339_05410 | Not Available | Positive | 1341644 - 1342771 | 42224.7 |
| alpha-n-arabinofuranosidase | E5339_05415 | Not Available | Positive | 1342784 - 1343755 | 36790.1 |
| glycoside hydrolase family 43 protein | E5339_05420 | Not Available | Positive | 1344104 - 1345840 | 64496.9 |
| tonb-dependent receptor | E5339_05425 | Not Available | Positive | 1345883 - 1348954 | 113099.0 |
| ragb/susd family nutrient uptake outer membrane protein | E5339_05430 | Not Available | Positive | 1348968 - 1350902 | 71555.2 |
| hybrid sensor histidine kinase/response regulator | E5339_05435 | Not Available | Negative | 1351217 - 1355257 | 154060.0 |
| hypothetical protein | E5339_05440 | Not Available | Negative | 1355279 - 1355470 | 7222.99 |
| carbohydrate-binding protein | E5339_05445 | Not Available | Positive | 1355495 - 1358002 | 94253.1 |
| glycosyl hydrolase 43 family protein | E5339_05450 | Not Available | Positive | 1358011 - 1359594 | 60357.6 |
| glycosyhydrolase | E5339_05455 | Not Available | Positive | 1359607 - 1362201 | 99342.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


