Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain NM22_B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1455082 bp
Thymine Count
1463396 bp
Guanine Count
1150699 bp
Cytosine Count
1106900 bp
Genome Length
5176077 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | E5339_05255 | Not Available | Positive | 1309639 - 1310112 | 18355.5 |
| endonuclease | E5339_05260 | Not Available | Negative | 1310191 - 1311201 | 38335.0 |
| aminoacyl-histidine dipeptidase | E5339_05265 | Not Available | Negative | 1311207 - 1312664 | 53092.4 |
| hypothetical protein | E5339_05270 | Not Available | Positive | 1312889 - 1313110 | 7884.87 |
| omph family outer membrane protein | E5339_05275 | Not Available | Positive | 1313142 - 1313756 | 23044.2 |
| thioredoxin | E5339_05280 | Not Available | Positive | 1313878 - 1314174 | 11320.9 |
| thioredoxin | E5339_05285 | Not Available | Positive | 1314178 - 1314636 | 16901.7 |
| nadh peroxidase | E5339_05290 | Not Available | Negative | 1314738 - 1315289 | 20595.4 |
| transcriptional repressor | E5339_05295 | Not Available | Negative | 1315366 - 1315776 | 15486.8 |
| nad(+) synthase | E5339_05300 | Not Available | Positive | 1315944 - 1317869 | 71135.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


