Phocaeicola sartorii strain NM22_B1

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola sartorii strain NM22_B1 is characterized by the presence of flagella, which may contribute to its motility and ecological adaptability. This strain features a single replicon, indicating a streamlined genomic organization that could influence its genetic stability and replication efficiency. The genomic information for this strain is cataloged under the accession number SRYJ00000000.1, which facilitates further research and identification. The presence of flagella suggests that Phocaeicola sartorii strain NM22_B1 might be capable of active movement in its environment, potentially allowing it to explore various niches or evade unfavorable conditions. Such motility could play a crucial role in its survival and interaction with other microorganisms. The single replicon may imply a more straightforward regulatory mechanism for gene expression and replication, which can be advantageous in rapidly changing environments. In summary, the motility enabled by flagella and the streamlined genomic structure of Phocaeicola sartorii strain NM22_B1 may provide insights into its ecological roles, particularly in environments where movement and adaptability are essential for survival. Understanding these traits can contribute to broader knowledge of microbial dynamics in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola sartorii
Strainstrain NM22_B1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola sartorii strain NM22_B1

Gene Summary

Adenine Count

1455082 bp

Thymine Count

1463396 bp

Guanine Count

1150699 bp

Cytosine Count

1106900 bp

Genome Length

5176077 bp

Protein-coding Genes

4021 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-amylaseE5339_05205Not AvailableNegative1293514 - 129492653963.7
glycosyltransferase family 1 proteinE5339_05210Not AvailableNegative1294945 - 129621047627.3
4-alpha-glucanotransferaseE5339_05215Not AvailableNegative1296225 - 129816574769.1
rhomboid family intramembrane serine proteaseE5339_05220Not AvailablePositive1298346 - 129901425404.2
duf4923 family proteinE5339_05225Not AvailableNegative1299160 - 129975621506.2
ragb/susd family nutrient uptake outer membrane proteinE5339_05230Not AvailableNegative1300001 - 130162060667.9
tonb-dependent receptorE5339_05235Not AvailableNegative1301642 - 1304683112709.0
glycoside hydrolase family 16 proteinE5339_05240Not AvailableNegative1304756 - 130553230018.4
helix-turn-helix domain-containing proteinE5339_05245Not AvailablePositive1305773 - 1308646110371.0
carboxylating nicotinate-nucleotide diphosphorylaseE5339_05250Not AvailableNegative1308707 - 130955831291.2

Displaying genes 1031 – 1040 of 4105 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.