Marinicauda algicola strain JCM 31718

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Maricaulales

Family

Maricaulaceae

Genus

Marinicauda

Description

Marinicauda algicola strain JCM 31718 is characterized by possessing a single replicon, which is a notable aspect of its genomic structure. This trait may influence its genetic stability and replication processes. The strain is cataloged under the accession number SRXW00000000.1, which provides a reference point for further genomic studies and analyses. As a member of the Marinicauda genus, this strain is indicative of a specific adaptation to marine environments, where it likely plays a role in the ecosystem. The presence of a single replicon could suggest a streamlined genetic organization, potentially enhancing its ability to thrive in competitive marine habitats. This adaptation might confer advantages in nutrient acquisition or interaction with other microorganisms. Understanding the genomic characteristics of Marinicauda algicola strain JCM 31718 can provide insights into its ecological role and the evolutionary pressures it faces in marine ecosystems. Its unique traits may influence its interactions with algal populations or other marine microbes, contributing to the overall dynamics of nutrient cycling and energy flow in these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderMaricaulales
FamilyMaricaulaceae
GenusMarinicauda
SpeciesMarinicauda algicola
Strainstrain JCM 31718

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinicauda algicola strain JCM 31718 contig_149, whole genome

Gene Summary

Adenine Count

544427 bp

Thymine Count

543887 bp

Guanine Count

1167372 bp

Cytosine Count

1170691 bp

Genome Length

3426473 bp

Protein-coding Genes

3262 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
p-type conjugative transfer protein trblE5163_15555Not AvailableNegative3187880 - 318919644454.0
p-type conjugative transfer protein trbjE5163_15560Not AvailableNegative3189203 - 318990126324.2
conjugal transfer protein trbeE5163_15565Not AvailableNegative3189911 - 319238291180.3
conjugal transfer proteinE5163_15570Not AvailableNegative3192376 - 31926338936.98
conjugal transfer protein trbcE5163_15575Not AvailableNegative3192633 - 319296811465.3
p-type conjugative transfer atpase trbbE5163_15580Not AvailableNegative3192965 - 319396035502.5
duf2285 domain-containing proteinE5163_15585Not AvailablePositive3194288 - 319513031684.2
hypothetical proteinE5163_15595Not AvailablePositive3198113 - 31982203797.72
30s ribosomal protein s10E5163_15600Not AvailablePositive3198617 - 319893111696.3
50s ribosomal protein l3E5163_15605Not AvailablePositive3198954 - 319975128153.6

Displaying genes 3081 – 3090 of 3362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.