Marinicauda algicola strain JCM 31718

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Maricaulales

Family

Maricaulaceae

Genus

Marinicauda

Description

Marinicauda algicola strain JCM 31718 is characterized by possessing a single replicon, which is a notable aspect of its genomic structure. This trait may influence its genetic stability and replication processes. The strain is cataloged under the accession number SRXW00000000.1, which provides a reference point for further genomic studies and analyses. As a member of the Marinicauda genus, this strain is indicative of a specific adaptation to marine environments, where it likely plays a role in the ecosystem. The presence of a single replicon could suggest a streamlined genetic organization, potentially enhancing its ability to thrive in competitive marine habitats. This adaptation might confer advantages in nutrient acquisition or interaction with other microorganisms. Understanding the genomic characteristics of Marinicauda algicola strain JCM 31718 can provide insights into its ecological role and the evolutionary pressures it faces in marine ecosystems. Its unique traits may influence its interactions with algal populations or other marine microbes, contributing to the overall dynamics of nutrient cycling and energy flow in these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderMaricaulales
FamilyMaricaulaceae
GenusMarinicauda
SpeciesMarinicauda algicola
Strainstrain JCM 31718

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinicauda algicola strain JCM 31718 contig_149, whole genome

Gene Summary

Adenine Count

544427 bp

Thymine Count

543887 bp

Guanine Count

1167372 bp

Cytosine Count

1170691 bp

Genome Length

3426473 bp

Protein-coding Genes

3262 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinE5163_09350Not AvailablePositive1946701 - 194854565856.9
duf4340 domain-containing proteinE5163_09355Not AvailablePositive1948542 - 194957636628.4
duf1223 domain-containing proteinE5163_09360Not AvailableNegative1949551 - 195027325677.5
hypothetical proteinE5163_09365Not AvailableNegative1950321 - 195108828958.1
nudix domain-containing proteinE5163_09370Not AvailableNegative1951145 - 195168420221.1
marr family transcriptional regulatorE5163_09375Not AvailablePositive1951808 - 195234719618.5
dsbe family thiol:disulfide interchange proteinE5163_09380Not AvailableNegative1952351 - 195289319473.3
heme exporter protein ccmdE5163_09385Not AvailableNegative1952890 - 19531207905.35
heme abc transporter permeaseE5163_09390Not AvailableNegative1953117 - 195386927769.4
cytochrome c biogenesis proteinE5163_09395Not AvailableNegative1953925 - 195459321675.2

Displaying genes 1881 – 1890 of 3362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.