Marinicauda algicola strain JCM 31718

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Maricaulales

Family

Maricaulaceae

Genus

Marinicauda

Description

Marinicauda algicola strain JCM 31718 is characterized by possessing a single replicon, which is a notable aspect of its genomic structure. This trait may influence its genetic stability and replication processes. The strain is cataloged under the accession number SRXW00000000.1, which provides a reference point for further genomic studies and analyses. As a member of the Marinicauda genus, this strain is indicative of a specific adaptation to marine environments, where it likely plays a role in the ecosystem. The presence of a single replicon could suggest a streamlined genetic organization, potentially enhancing its ability to thrive in competitive marine habitats. This adaptation might confer advantages in nutrient acquisition or interaction with other microorganisms. Understanding the genomic characteristics of Marinicauda algicola strain JCM 31718 can provide insights into its ecological role and the evolutionary pressures it faces in marine ecosystems. Its unique traits may influence its interactions with algal populations or other marine microbes, contributing to the overall dynamics of nutrient cycling and energy flow in these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderMaricaulales
FamilyMaricaulaceae
GenusMarinicauda
SpeciesMarinicauda algicola
Strainstrain JCM 31718

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinicauda algicola strain JCM 31718 contig_149, whole genome

Gene Summary

Adenine Count

544427 bp

Thymine Count

543887 bp

Guanine Count

1167372 bp

Cytosine Count

1170691 bp

Genome Length

3426473 bp

Protein-coding Genes

3262 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tryptophan-rich sensory proteinE5163_09000Not AvailableNegative1873846 - 187434318048.2
n-acetyltransferaseE5163_09005Not AvailablePositive1874535 - 187508020317.9
lyttr family transcriptional regulatorE5163_09010Not AvailableNegative1875077 - 187568522004.5
duf2306 domain-containing proteinE5163_09015Not AvailablePositive1876139 - 187653414237.9
duf1036 domain-containing proteinE5163_09020Not AvailablePositive1876615 - 187746029670.3
alkaline phosphatase family proteinE5163_09025Not AvailablePositive1877535 - 187875545279.0
proline--trna ligaseE5163_09030Not AvailableNegative1878826 - 188034957301.6
giy-yig nuclease family proteinE5163_09035Not AvailableNegative1880575 - 188111419716.5
is1595 family transposaseE5163_09040Not AvailableNegative1881115 - 188207436477.4
hypothetical proteinE5163_09045Not AvailablePositive1882174 - 188253614010.0

Displaying genes 1811 – 1820 of 3362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.