Marinicauda algicola strain JCM 31718

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Maricaulales

Family

Maricaulaceae

Genus

Marinicauda

Description

Marinicauda algicola strain JCM 31718 is characterized by possessing a single replicon, which is a notable aspect of its genomic structure. This trait may influence its genetic stability and replication processes. The strain is cataloged under the accession number SRXW00000000.1, which provides a reference point for further genomic studies and analyses. As a member of the Marinicauda genus, this strain is indicative of a specific adaptation to marine environments, where it likely plays a role in the ecosystem. The presence of a single replicon could suggest a streamlined genetic organization, potentially enhancing its ability to thrive in competitive marine habitats. This adaptation might confer advantages in nutrient acquisition or interaction with other microorganisms. Understanding the genomic characteristics of Marinicauda algicola strain JCM 31718 can provide insights into its ecological role and the evolutionary pressures it faces in marine ecosystems. Its unique traits may influence its interactions with algal populations or other marine microbes, contributing to the overall dynamics of nutrient cycling and energy flow in these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderMaricaulales
FamilyMaricaulaceae
GenusMarinicauda
SpeciesMarinicauda algicola
Strainstrain JCM 31718

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinicauda algicola strain JCM 31718 contig_149, whole genome

Gene Summary

Adenine Count

544427 bp

Thymine Count

543887 bp

Guanine Count

1167372 bp

Cytosine Count

1170691 bp

Genome Length

3426473 bp

Protein-coding Genes

3262 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome maturation factor rimpE5163_06780Not AvailablePositive1428216 - 142877620268.1
transcription termination/antitermination protein nusaE5163_06785Not AvailablePositive1428797 - 143054564355.1
rna-binding proteinE5163_06790Not AvailablePositive1430542 - 143119822732.3
translation initiation factor if-2E5163_06795Not AvailablePositive1431342 - 143391593985.0
dmt family transporterE5163_06800Not AvailablePositive1434057 - 143451815589.6
30s ribosome-binding factor rbfaE5163_06805Not AvailablePositive1434619 - 143500514159.0
trna pseudouridine(55) synthase trubE5163_06810Not AvailablePositive1435011 - 143597034309.2
30s ribosomal protein s15E5163_06815Not AvailablePositive1436160 - 143642910476.7
polyribonucleotide nucleotidyltransferaseE5163_06820Not AvailablePositive1436518 - 143864476789.2
hypothetical proteinE5163_06825Not AvailablePositive1438763 - 143920916252.9

Displaying genes 1371 – 1380 of 3362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.