Marinicauda algicola strain JCM 31718

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Maricaulales

Family

Maricaulaceae

Genus

Marinicauda

Description

Marinicauda algicola strain JCM 31718 is characterized by possessing a single replicon, which is a notable aspect of its genomic structure. This trait may influence its genetic stability and replication processes. The strain is cataloged under the accession number SRXW00000000.1, which provides a reference point for further genomic studies and analyses. As a member of the Marinicauda genus, this strain is indicative of a specific adaptation to marine environments, where it likely plays a role in the ecosystem. The presence of a single replicon could suggest a streamlined genetic organization, potentially enhancing its ability to thrive in competitive marine habitats. This adaptation might confer advantages in nutrient acquisition or interaction with other microorganisms. Understanding the genomic characteristics of Marinicauda algicola strain JCM 31718 can provide insights into its ecological role and the evolutionary pressures it faces in marine ecosystems. Its unique traits may influence its interactions with algal populations or other marine microbes, contributing to the overall dynamics of nutrient cycling and energy flow in these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderMaricaulales
FamilyMaricaulaceae
GenusMarinicauda
SpeciesMarinicauda algicola
Strainstrain JCM 31718

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinicauda algicola strain JCM 31718 contig_149, whole genome

Gene Summary

Adenine Count

544427 bp

Thymine Count

543887 bp

Guanine Count

1167372 bp

Cytosine Count

1170691 bp

Genome Length

3426473 bp

Protein-coding Genes

3262 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aromatic ring-hydroxylating dioxygenase subunit alphaE5163_06525Not AvailableNegative1383441 - 138479050283.4
alpha/beta fold hydrolaseE5163_06530Not AvailableNegative1384843 - 138568230974.0
fcd domain-containing proteinE5163_06535Not AvailablePositive1386015 - 138674326589.6
lysr family transcriptional regulatorE5163_06540Not AvailablePositive1387088 - 138804134357.6
xre family transcriptional regulatorE5163_06545Not AvailableNegative1388024 - 13882458091.73
duf2285 domain-containing proteinE5163_06550Not AvailablePositive1388522 - 138882411680.6
conjugal transfer protein tragE5163_06555Not AvailablePositive1388947 - 139093873336.9
ribbon-helix-helix protein, copg familyE5163_06560Not AvailablePositive1390948 - 139140916909.0
p-type conjugative transfer atpase trbbE5163_06565Not AvailablePositive1391555 - 139253834520.6
conjugal transfer protein trbcE5163_06570Not AvailablePositive1392535 - 139286711228.9

Displaying genes 1321 – 1330 of 3362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.