Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1143280 bp
Thymine Count
1149365 bp
Guanine Count
1192598 bp
Cytosine Count
1180671 bp
Genome Length
4665914 bp
Protein-coding Genes
4265 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | E5P21_20220 | Not Available | Negative | 4166233 - 4166715 | 18000.5 |
| hypothetical protein | E5P21_20225 | Not Available | Negative | 4166739 - 4168091 | 50779.5 |
| type vi secretion system membrane subunit tssm | E5P21_20230 | Not Available | Negative | 4168102 - 4171536 | 130844.0 |
| type vi secretion system protein tssa | E5P21_20235 | Not Available | Negative | 4171645 - 4173057 | 52392.2 |
| type vi secretion system-associated protein tago | E5P21_20240 | Not Available | Negative | 4173062 - 4173805 | 26442.7 |
| type vi secretion system atpase tssh | E5P21_20245 | Not Available | Negative | 4173802 - 4176561 | 100754.0 |
| dotu family type iv/vi secretion system protein | E5P21_20250 | Not Available | Negative | 4176570 - 4177331 | 29415.8 |
| type vi secretion system baseplate subunit tssk | E5P21_20255 | Not Available | Negative | 4177336 - 4178667 | 49981.9 |
| type vi secretion system lipoprotein tssj | E5P21_20260 | Not Available | Negative | 4178670 - 4179194 | 19368.0 |
| type vi secretion system-associated fha domain protein tagh | E5P21_20265 | Not Available | Negative | 4179191 - 4180471 | 47437.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





