Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1143280 bp
Thymine Count
1149365 bp
Guanine Count
1192598 bp
Cytosine Count
1180671 bp
Genome Length
4665914 bp
Protein-coding Genes
4265 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin triphosphate diphosphatase | E5P21_01355 | Not Available | Positive | 251555 - 252007 | 17222.5 |
| yebc/pmpr family dna-binding transcriptional regulator | E5P21_01360 | Not Available | Positive | 252036 - 252776 | 26438.1 |
| crossover junction endodeoxyribonuclease ruvc | E5P21_01365 | Not Available | Positive | 252811 - 253332 | 18747.9 |
| yebb family permuted papain-like enzyme | E5P21_01370 | Not Available | Negative | 253334 - 253936 | 22676.2 |
| hypothetical protein | E5P21_01375 | Not Available | Positive | 254007 - 254072 | 2699.43 |
| holliday junction branch migration protein ruva | E5P21_01380 | Not Available | Positive | 254211 - 254822 | 22087.0 |
| holliday junction branch migration dna helicase ruvb | E5P21_01385 | Not Available | Positive | 254831 - 255841 | 37176.0 |
| zinc abc transporter permease subunit znub | E5P21_01390 | Not Available | Negative | 255988 - 256773 | 27762.5 |
| zinc abc transporter atp-binding protein znuc | E5P21_01395 | Not Available | Negative | 256770 - 257525 | 27869.3 |
| zinc abc transporter substrate-binding protein znua | E5P21_01400 | Not Available | Positive | 257604 - 258536 | 33865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





