Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1143280 bp
Thymine Count
1149365 bp
Guanine Count
1192598 bp
Cytosine Count
1180671 bp
Genome Length
4665914 bp
Protein-coding Genes
4265 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | E5P21_16680 | Not Available | Negative | 3432875 - 3433783 | 34188.2 |
| nad(p)h oxidoreductase | E5P21_16685 | Not Available | Positive | 3433883 - 3434473 | 23009.3 |
| pyruvate formate lyase 1-activating protein | E5P21_16690 | Not Available | Negative | 3434555 - 3435295 | 28205.9 |
| formate c-acetyltransferase | E5P21_16695 | Not Available | Negative | 3435487 - 3437769 | 85291.0 |
| formate transporter foca | E5P21_16700 | Not Available | Negative | 3437824 - 3438681 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | E5P21_16705 | Not Available | Negative | 3439087 - 3440847 | 65655.0 |
| duf421 domain-containing protein | E5P21_16710 | Not Available | Positive | 3440977 - 3441669 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | E5P21_16715 | Not Available | Positive | 3441868 - 3442956 | 39842.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | E5P21_16720 | Not Available | Positive | 3443027 - 3444310 | 46029.4 |
| metalloprotease | E5P21_16725 | Not Available | Positive | 3444479 - 3445243 | 26768.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





