Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1143280 bp
Thymine Count
1149365 bp
Guanine Count
1192598 bp
Cytosine Count
1180671 bp
Genome Length
4665914 bp
Protein-coding Genes
4265 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide response transcriptional regulator soxs | E5P21_13335 | Not Available | Negative | 2733853 - 2734176 | 12911.6 |
| redox-sensitive transcriptional activator soxr | E5P21_13340 | Not Available | Positive | 2734262 - 2734726 | 17150.7 |
| ncs2 family permease | E5P21_13345 | Not Available | Positive | 2735272 - 2736621 | 45714.4 |
| na+/h+ antiporter | E5P21_13350 | Not Available | Positive | 2736772 - 2738421 | 60527.5 |
| pentapeptide repeat-containing protein | E5P21_13355 | Not Available | Negative | 2738575 - 2739867 | 49363.0 |
| cation/acetate symporter actp | E5P21_13360 | Not Available | Negative | 2740045 - 2741694 | 59186.7 |
| duf485 domain-containing protein | E5P21_13365 | Not Available | Negative | 2741691 - 2742005 | 11672.3 |
| acetate--coa ligase | E5P21_13370 | Not Available | Negative | 2742205 - 2744163 | 72097.5 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | E5P21_13375 | Not Available | Positive | 2744555 - 2745991 | 53705.7 |
| cytochrome c nitrite reductase pentaheme subunit | E5P21_13380 | Not Available | Positive | 2746036 - 2746602 | 20715.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





