Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | E5P20_24980 | Not Available | Negative | 4883824 - 4884128 | 11428.4 |
| hypothetical protein | E5P20_24985 | Not Available | Positive | 4884129 - 4884224 | 3834.38 |
| is3 family transposase | E5P20_24995 | Not Available | Positive | 4884441 - 4884739 | 11309.5 |
| type vi secretion system tip protein vgrg | E5P20_25000 | Not Available | Positive | 4884740 - 4885034 | 11543.5 |
| Trna-glu | Not Available | Not Available | Positive | 4885086 - 4885161 | Not Available |
| is5/is1182 family transposase | E5P20_25015 | Not Available | Negative | 4885330 - 4885611 | 10660.5 |
| is4 family transposase | E5P20_25030 | Not Available | Negative | 4886171 - 4886440 | 10302.5 |
| is5/is1182 family transposase | E5P20_25035 | Not Available | Positive | 4886703 - 4886963 | 9921.09 |
| transposase | E5P20_25040 | Not Available | Negative | 4886964 - 4887223 | 10009.0 |
| is1 family transposase | E5P20_25045 | Not Available | Positive | 4887224 - 4887333 | 4160.06 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





