Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | E5P20_24440 | Not Available | Negative | 4817742 - 4817856 | 4387.34 |
| hypothetical protein | E5P20_24445 | Not Available | Negative | 4817857 - 4817923 | 2169.58 |
| galactitol-1-phosphate 5-dehydrogenase | E5P20_24450 | Not Available | Positive | 4817994 - 4819034 | 37392.3 |
| deor/glpr transcriptional regulator | E5P20_24455 | Not Available | Positive | 4819134 - 4819913 | 27960.9 |
| lipid kinase yegs | E5P20_24460 | Not Available | Negative | 4819995 - 4820894 | 32006.6 |
| is1 family transposase | E5P20_24465 | Not Available | Negative | 4821157 - 4821266 | 4160.06 |
| is1 family transposase | E5P20_24470 | Not Available | Positive | 4821267 - 4821376 | 4160.06 |
| lysis protein | E5P20_24475 | Not Available | Positive | 4821386 - 4821811 | 15905.9 |
| trk system potassium uptake protein trkg | E5P20_24480 | Not Available | Positive | 4821949 - 4823406 | 53946.9 |
| transcriptional regulator | E5P20_24485 | Not Available | Positive | 4823544 - 4824335 | 29769.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





