Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stba | E5P20_24005 | Not Available | Positive | 4765017 - 4765151 | 5112.89 |
| plasmid stabilization protein | E5P20_24010 | Not Available | Positive | 4765160 - 4765351 | 6844.19 |
| duf4145 domain-containing protein | E5P20_24015 | Not Available | Positive | 4765429 - 4768368 | 111295.0 |
| tetratricopeptide repeat protein | E5P20_24020 | Not Available | Positive | 4768365 - 4769789 | 53933.7 |
| hypothetical protein | E5P20_24035 | Not Available | Positive | 4770070 - 4770349 | 9921.07 |
| class a extended-spectrum beta-lactamase shv-12 | E5P20_24040 | Not Available | Positive | 4770270 - 4771130 | 31269.9 |
| deor/glpr transcriptional regulator | E5P20_24045 | Not Available | Negative | 4771151 - 4771912 | 27339.8 |
| hypothetical protein | E5P20_24050 | Not Available | Positive | 4771903 - 4772136 | 8780.63 |
| nad(p)-dependent oxidoreductase | E5P20_24055 | Not Available | Positive | 4772174 - 4773076 | 30509.0 |
| is6 family transposase | E5P20_24070 | Not Available | Positive | 4774784 - 4774858 | 2724.26 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





